Browse of TCMCG006C29464 protein

CDS

Accession Number	TCMCG006C29464
gbkey	CDS
Protein Id	XP_022547176.1
Location	join(42181855..42181903,42182257..42182368,42182518..42182698,42182830..42183012,42183197..42183379,42183485..42183566,42183695..42183813,42183921..42184216,42184345..42184441,42184611..42184751,42184848..42184931,42185029..42185115,42185299..42185439,42185529..42185654,42185778..42185876,42186071..42186138,42186245..42186311,42186459..42186629,42186708..42186797,42186903..42186983,42187078..42187151,42187260..42187331,42187407..42187496,42187615..42187681)
Gene	LOC106434675
GeneID	106434675
Organism	Brassica napus

Protein

Length	919aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_022691455.1
Definition	E3 ubiquitin-protein ligase UPL6-like isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Ubiquitin-protein ligase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K10589        [VIEW IN KEGG]
EC	2.3.2.26        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04120        [VIEW IN KEGG] map04120        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004842        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006464        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016567        [VIEW IN EMBL-EBI] GO:0016740        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019787        [VIEW IN EMBL-EBI] GO:0032446        [VIEW IN EMBL-EBI] GO:0036211        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044267        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0061630        [VIEW IN EMBL-EBI] GO:0061659        [VIEW IN EMBL-EBI] GO:0070647        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCTTGTGGAGACGTGTCGTCTACTGCGAAATTTTGCCCACAGCAGTGGGGACATTCTAAGCCTTTTCTCTGGCTTGGACTACTCTACTGAGCATAATACGGTGGATTTTAGAGTAAAGAAACTTGCATTTACCTGCATCGAGGCTATACATCAGAATAGGGAATGTTTAAGGGATCAGCTCTTAGTTACTCCGGAAGAAGCTACCATTTCAACAGCTATCTTGATGGATGCGATGTCGTTGTTGCTAGATCCTAAGCTGCCTTGGGTTTGCAAAATAGTTAGCCATCTACAGAAAAGAAACATATTCAAACTGGTCCGAGAAATTGTGACTACGGCTAAGGAAGGCTCAAGAAGTCCGACTATGAACGGCAGCATCCTTTCACTAGAAAGTGTATTGTTTCTGGTAGTACCACACGTTGGCCGTGAGCCATGTTGCTGCCCTGTTGTTGATCCACGTTGGAGTTTCTCATCTATGATCCTTACCATACCCTTTATATGGCAGCTCTTCCCAAACTTGAAAGTGGTCTTTGCTAACCCAAGTCTAAGTCAACACTACGTTCACCAGATGGCTTTATGTATCCAAAAGGATACCCATGTTCTCCCAATAGATACAAACACAGAATTTCCTGGTAATGCTTGTCTTCTTGGTAATACATTGGAAATTGCAAACGTGGTCTTGTCACAGCCTGAATGTTCATTGGACATGGCAATTGACATTGCATCAGTTGCAACTTTCTTATTGGAGACACTTCCTCCTATTAAGTCATCAGAAAGAGAAAGCAGACATAGCTCTTCTGAAGAGGATGATGATATGTTGATTGACGATGTACAAGAATTAGTCTTGAATAGGACTTTGGAGCAGCAGATAACTACCAATGCTATAGACTCACGTTTTCTTCTGCAGTTAACAAATATTTTGTTCCATCAAGTTTCGGGTGGTACGCAGTCATATGACGAAGATAAAGAAGCACTAGCTATTGCCACAGGCAGTTCTTTTCTGTATGCGGCATTCAACATTCTCCCTCTTGAGCGAATAATGACAGTTTTGGCTTATAGAACCGAGCTTGTAGCTGTGTTGTGGAATTATATGAAGCGATGCCATGAGAACCAGAAGTGGTCATCCATGCCTAGTGTCCTAGCTTATCTTCCAGCGGATTCCCCGGGTTGGCTATTACCTCTGGTTGTCTTTTGTCCTGTTTATAAGCATATGCTTACGATTGTCGATAATGAGGAATTTTACGAACGAGGAAAGCCACTATCGCTACAAGATAACAGGTTGCTCATCATCATTCTCAAGCAAGCTTTATGGCAGTTACTGTGGGTGAATCCACTTACGCAACATAACTCTGGGATATCTGTCTCCAACGACCTCTCAAAGAAAAACCGTGTTGACTTAATTCAGAACAGGGTTGGGGTTGTAATCGCTGAGTTACTTTCACAGTTTCAAGATTGGAACAACCGGCAACAATTCACTTCCTCGACCGACTTTCAAGCTGATACAGTCAGTGAATATTTTATCACTCAGGCTATAGTGGAAGGTACAAGAGCCAGCTACATACTGATGCAGGCTCCTTTCCTGATTCCGTTTACAAGCAGAGTCAAAATATTCACAACACAATTAGCAACGGCGAGGCAGAGTCATGGATCTGAAGAAATTTTTGCTGGAAATCGGTTTAGAATACGAAGAGATCACATCTTGGATGATGCTTACAATCAAATGAGTGCATTGTCAGAGGATGATCTCCGAGGACCAATTCGTGTGACGTTTGTCAATGAACTCGGAGTTGAGGAAGCCGGTATTGATGGTGGTGGCATTTTCAAAGACTTTATGGAGAAAATTACCCTAGCAGCCTTTGATGTGCAATATGGGTTGTTTAAGGAAACCGTTGATCACATGCTTTATCCTAATCCTGGATCAGGAATGATACATGGACAGCATCTCCAGTTCTTTCATTTTCTCGGCAGTCTTCTCGCAAAAGCTATGTTTGAAGGGATTCTAGTTGATTTACCATTTGCAACGTTTTTCCTCAGCAAATTGAAACAAAAGTACAACTATTTGAACGATCTGCCCTCTCTGGATCCTGAGTTGTATCGGCATCTTATATTTCTGAAGCGTTATAAGGGCGATATATCAGACTTGGAGCTTTACTTTGTTATTCTGAACAATGAATATGGAGAGAGAACAGAGGAAGAGCTACTTCCAGGGGGCAAAGACATGCGAGTCACAAATAAAAATGTTATAACTTTCATTCATCTGGTTTCCAATCATCGGCTAAACTTTCAGATACGCCAGCAGAGTTCTCATTTCTTGAGGGGGTTTCAGCAACTCATTCCGAGAGAATGGATAGACATGTTCAATGAACATGAGCTCCAGGTTCTCATATCTGGTTCAGCTGATAGTTTGGATATTGACGACTTGCGAGAGAACACCAATTATTCTGGAGGCTACAACGCTGGACATTATGTGATTGATATGTTCTGGGAAGTAATGAAAAGCTTCTCAACCGAAAACCAGAAGAAGTTCTTGAAATTTGTAACGGGTTGTTCAAGAGGACCACTGCTCGGTTTCAAGTACTTGGAACCTGCATTCTGTATACAGAGGGCTGGTGGTAGCGTGAGTAATGAAGCAGTTGATAGACTACCGACATCAGCCACTTGTATGAACCTTCTTAAGCTTCCACCCTATCAAAGCAAAGAGCAACTTGAGACCAAATTGATGTACGCCATAAGCGCAGAAGCAGGCTTTGATCTGAGCTGA

Protein:   MLVETCRLLRNFAHSSGDILSLFSGLDYSTEHNTVDFRVKKLAFTCIEAIHQNRECLRDQLLVTPEEATISTAILMDAMSLLLDPKLPWVCKIVSHLQKRNIFKLVREIVTTAKEGSRSPTMNGSILSLESVLFLVVPHVGREPCCCPVVDPRWSFSSMILTIPFIWQLFPNLKVVFANPSLSQHYVHQMALCIQKDTHVLPIDTNTEFPGNACLLGNTLEIANVVLSQPECSLDMAIDIASVATFLLETLPPIKSSERESRHSSSEEDDDMLIDDVQELVLNRTLEQQITTNAIDSRFLLQLTNILFHQVSGGTQSYDEDKEALAIATGSSFLYAAFNILPLERIMTVLAYRTELVAVLWNYMKRCHENQKWSSMPSVLAYLPADSPGWLLPLVVFCPVYKHMLTIVDNEEFYERGKPLSLQDNRLLIIILKQALWQLLWVNPLTQHNSGISVSNDLSKKNRVDLIQNRVGVVIAELLSQFQDWNNRQQFTSSTDFQADTVSEYFITQAIVEGTRASYILMQAPFLIPFTSRVKIFTTQLATARQSHGSEEIFAGNRFRIRRDHILDDAYNQMSALSEDDLRGPIRVTFVNELGVEEAGIDGGGIFKDFMEKITLAAFDVQYGLFKETVDHMLYPNPGSGMIHGQHLQFFHFLGSLLAKAMFEGILVDLPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKRYKGDISDLELYFVILNNEYGERTEEELLPGGKDMRVTNKNVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPREWIDMFNEHELQVLISGSADSLDIDDLRENTNYSGGYNAGHYVIDMFWEVMKSFSTENQKKFLKFVTGCSRGPLLGFKYLEPAFCIQRAGGSVSNEAVDRLPTSATCMNLLKLPPYQSKEQLETKLMYAISAEAGFDLS